Makes amends (6)
I believe the answer is:
<span class="explanation-format__ClueExplanation">'<span class="explanation-format__original">makes amends</span>' is the definition.<br/ ><span class="explanation-format__explanation">(I've seen this in another clue)</span><br/ ><br/ >This is the entire clue.<br/ ></span>
(Other definitions for atones that I've seen before include "Does penance with a stone" , "Makes reparation" , "Makes redress" , "Make amends for sin" , "Makes up for injury inflicted" .)