By no means in a bad way (6)

I believe the answer is:

nicely

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'by' is the definition.
Both the answer and definition are adverbs. Perhaps they are linked in a way I don't understand?

I can't explain the remainder of the clue.

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(Other definitions for nicely that I've seen before include "In a pleasant way" , "well - with 16d" , "Good-naturedly" , "Agreeably, delightfully" , "'Amiably, pleasantly (6)'" .)

I've seen this clue in the Evening Standard.

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