By some reckoning, great as a loss can be (4)
I believe the answer is:
dead
'by' is the definition.
(thesaurus)
I don't understand how the remainder of the clue works.
Can you help me to learn more?
(Other definitions for dead that I've seen before include "No longer alive" , "Late; exact" , "Unresponsive" , "Stiff - bereft of life" , "Gone to meet one's Maker" .)